MRIQC: individual T1w report

Summary

  • BIDS filename: sub-1062_ses-1_T1w.
  • Date and time: 2024-07-08, 12:10.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6717707021800274
cnr2.0398793720643305
efc0.6558363345040374
fber298.8255280667552
fwhmavg4.409483333333333
fwhmx4.44711
fwhmy4.64206
fwhmz4.13928
icvscsf0.2028654703671216
icvsgm0.41588849445920206
icvswm0.3812460351736763
inumed1.9682486057281494
inurange1.2404310047626497
qi10.0
qi20.006244574074390941
rpvecsf29.0292871675291
rpvegm14.738902721527028
rpvewm18.994354602124094
sizex192
sizey256
sizez256
snrcsf3.390858273510211
snrgm9.415336666655307
snrtotal9.560365350081996
snrwm15.874901110080469
snrdcsf18.82188037332921
snrdgm35.1506116350547
snrdtotal32.93111974869853
snrdwm44.82086723771167
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk1.5770766007086339
summarybgmad14.616771133707937
summarybgmean39.56954886840137
summarybgmedian37.82689802348614
summarybgn2693857.0
summarybgp0519.146948382258415
summarybgp9571.2432523816824
summarybgstdv16.768919154620928
summarycsfk15.307512433783618
summarycsfmad108.39489751260254
summarycsfmean437.24410178135736
summarycsfmedian419.9356456845999
summarycsfn19679.0
summarycsfp05272.3536657691002
summarycsfp95650.4254687577486
summarycsfstdv123.84032066179493
summarygmk-0.09343282756656501
summarygmmad84.54648145234222
summarygmmean788.8683683828388
summarygmmedian784.2465524375439
summarygmn16932.0
summarygmp05658.1568923592567
summarygmp95931.4782832972705
summarygmstdv83.29212445084792
summarywmk0.27914094333073036
summarywmmad60.39034389453016
summarywmmean1002.1517796260159
summarywmmedian999.9999707937241
summarywmn217097.0
summarywmp05901.5670139342546
summarywmp951109.1738986968994
summarywmstdv62.992371463541616
tpmoverlapcsf0.16878825426101685
tpmoverlapgm0.4639233946800232
tpmoverlapwm0.5120614767074585
wm2max0.6291142704690772
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime16:41:24.922500
BaseResolution256
CoilCombinationMethodAdaptive Combine
CoilStringT:HEA;HEP
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber35451
DwellTime3e-06
EchoTime0.00164
FlipAngle7
ImageOrientationPatientDICOM[-0.076719, 0.997053, -6.14258e-08, 0.0521817, 0.0040151, -0.99863]
ImageOrientationTextSag>Cor(-4.4)>Tra(-3.0)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.223
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressExposition Drive 1777,Boulder- 6392da-,Denver,US,80301
InstitutionNameIntermountain Neuroimaging Consortium
InstitutionalDepartmentNameDepartment
InversionTime1.2
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNameTrioTim
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages5
ParallelReductionFactorInPlane2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps255
PhaseResolution1
PixelBandwidth651
ProcedureStepDescriptionVMITTAL^frontalsub_200007
ProtocolNamemprage_5e
PulseSequenceDetails%CustomerSeq%\tfl_mgh_multiecho
ReceiveCoilNameHeadMatrix
ReconMatrixPE256
RefLinesPE32
RepetitionTime2.53
SAR0.0945619
ScanOptionsIR
ScanningSequenceGR\IR
SequenceNametfl3d5_ns
SequenceVariantSP\MP
SeriesDescriptionmprage_5e RMS
SeriesNumber3
ShimSetting[6775, 12605, -7166, -44, 314, -274, -21, 114]
SliceThickness1
SoftwareVersionssyngo MR B17
StationNameMRC35451
TxRefAmp346.249
md5sumd01f4a011d06a0fb3e729bc9ce9156ab
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.